Process all supported actigraphy files in a directory — acti_process

Files are read according to their extension, passed to acti_process(), and saved as individual RDS files in outdir. Supported extensions are GT3X, CWA, GeneActiv BIN, and CSV, including .gz and .xz compressed suffixes for the supported formats described below.

Usage

acti_process_study(directory, outdir, verbose = TRUE, ...)

Arguments

directory: Directory containing raw actigraphy files.
outdir: Directory in which processed RDS files are saved. Created if needed.
verbose: Logical; report progress for each file. Failures are always reported with a warning.
...: Arguments passed to acti_process().

Value

Invisibly, a character vector of paths to the saved RDS files. Files that failed are listed in its failed attribute: a named character vector of error messages, named by input file. Each RDS contains the processed data, with the raw reader header attached as the header attribute when available.